Example of a complete fasta file that can be used as input

This database contains sequences in fasta format

This is an example of a fasta file from TcMUC family to be used as input

Usage

tcmuc_fasta

tcmuc_fasta

Format

complete fasta file containing headers and sequences

fasta

Examples

# Load file
data(tcmuc_fasta)

# Visualize the file
head(tcmuc_fasta)
#> AAStringSet object of length 6:
#>     width seq                                               names               
#> [1]   237 MMTCRLLCALLVLALCCCPSVWA...SSSAWVCAPLLLAASALAYTTLG TcYC6_0150500-RA-p1
#> [2]   190 MMTCRLLCALLVLALCCCPSVCA...SSSAWVCAPLVLAASALVYTTLG TcYC6_0150510-RA-p1
#> [3]   202 MMTCRLLCALLVLALCCCPSVCA...SSSAWVCAPLLLAVSALAYTTVG TcYC6_0150520-RA-p1
#> [4]   189 MMMTCRLLCPLLVLALCCCPSVG...SSSAWVCAPLLLAASALAYTTLG TcYC6_0150530-RA-p1
#> [5]   208 MMTCRLLCALLVLVLCCCPSVCV...SSSAWVCAPLLLAASALAYTTLG TcYC6_0150540-RA-p1
#> [6]   229 MTTCRLLCALLVLALCCCPSVCA...SSSAWVCAPLLLAVSALAYTTLG TcYC6_0150550-RA-p1