This function calculates the similarity scores between two sequences
Usage
calc_similarity(seq1, seq2, alignment_method, substitutionMatrix, myseq)
Arguments
- seq1
A value or the magrittr placeholder.
- seq2
A function call using the magrittr semantics.
- alignment_method
type of alignment local or global
- substitutionMatrix
substitution matrix to be used
- myseq
sequences to be used
Value
a dataframe with the similarity scores